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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900205.1_cds_XP_016450237.1_44711
CDS Infomation

[gene=LOC107775078] [db_xref=GeneID:107775078] [protein=protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like] [protein_id=XP_016450237.1] [location=complement(join(61786..62378,62479..62599))] [gbkey=CDS]
Sequence

ATGGATTCTACATCCAGGGTTGGAGCATCCAACCCGAACAATAACGGAGGAGGAGGAGGA
GGAGGAGGAGGAGAGGGTCCATCATCAGCAACTGCCAGTGGTCGGATCACTGAGAGTGAA
GGAGGATCTGCGGCTCCTGCAGCACCACCGAGCCGGTACGAGTCACAAAAGCGTCGAGAT
TGGAACACTTTCTTACAGTACTTAAGGAACCACAAACCACCGTTAACCCTAGCCCGCTGC
AGCGGAGCTCACGTGATCGAGTTCCTAAAATACCTCGATCAGTTCGGGAAGACGAAAGTG
CACGTGACCGGGTGCCCTTATTTCGGGCACCCGAATCCACCAGCACCATGTGCTTGTCCG
TTGAAACAGGCTTGGGGTAGCCTTGACGCACTAATTGGTAGGCTAAGAGCTGCTTATGAA
GAAAATGGAGGAAAGCCTGAATCAAATCCTTTTGGTGCTAAAGCTGTTAGAATATATTTA
AGGGAAGTTAGAGAAAGTCAAGCTAAAGCTAGAGGAATACCTTATGAAAAGAAGAAACGG
AAAAGGCCAAGTTCCAGTTCGGTCACGGCTGGCAGCAGCGCTAGCCGCGGCGGTGTTATT
GCAGTAGAAGGCGGTGGTAGTGGTGGCGGAGATGGTGGAGGTAATGCTGGTGATAGCAGT
GGTGGCGGTGCTGCTATTGGTCCGCTACCTACTGCTACTAATCCAACAGAATAG

Peptide Sequence

PEP ID

XP_016450237.1
PEP Infomation

PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Nicotiana tabacum]
Sequence

MDSTSRVGASNPNNNGGGGGGGGGEGPSSATASGRITESEGGSAAPAAPPSRYESQKRRD
WNTFLQYLRNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHVTGCPYFGHPNPPAPCACP
LKQAWGSLDALIGRLRAAYEENGGKPESNPFGAKAVRIYLREVRESQAKARGIPYEKKKR
KRPSSSSVTAGSSASRGGVIAVEGGGSGGGDGGGNAGDSSGGGAAIGPLPTATNPTE

Transcript Sequence

Gene sequence data has not been registered.